Package: manhplot 1.1

manhplot: The Manhattan++ Plot

This plot integrates annotation into a manhattan plot. The plot is implemented as a heatmap, which is binned using -log10(p-value) and chromosome position. Annotation currently supported is minor allele frequency and gene function high impact variants.

Authors:Chris Grace <[email protected]>

manhplot_1.1.tar.gz
manhplot_1.1.zip(r-4.5)manhplot_1.1.zip(r-4.4)manhplot_1.1.zip(r-4.3)
manhplot_1.1.tgz(r-4.4-any)manhplot_1.1.tgz(r-4.3-any)
manhplot_1.1.tar.gz(r-4.5-noble)manhplot_1.1.tar.gz(r-4.4-noble)
manhplot_1.1.tgz(r-4.4-emscripten)manhplot_1.1.tgz(r-4.3-emscripten)
manhplot.pdf |manhplot.html✨
manhplot/json (API)

# Install 'manhplot' in R:
install.packages('manhplot', repos = c('https://cgrace1978.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/cgrace1978/manhplot/issues

On CRAN:

4.19 score 26 stars 12 scripts 150 downloads 1 exports 35 dependencies

Last updated 2 years agofrom:aa1aa5abd2. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 12 2024
R-4.5-winOKNov 12 2024
R-4.5-linuxOKNov 12 2024
R-4.4-winOKNov 12 2024
R-4.4-macOKNov 12 2024
R-4.3-winOKNov 12 2024
R-4.3-macOKNov 12 2024

Exports:manhplusplot

Dependencies:clicolorspacefansifarverggplot2ggrepelgluegridExtragtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigplyrR6RColorBrewerRcppreshape2rlangscalesstringistringrtibbleutf8vctrsviridisLitewithr

Readme and manuals

Help Manual

Help pageTopics
The Manhattan++ Plotmanhplot-package manhplot
Generate the manhattan++ plotmanhplusplot